Homologous genes and blocks

Intra/interenomic Block_lens >4 Block_lens >10 Block_lens >20 Block_lens >50 ACP LDB LDB on chromosomes
V. vinifera vs V. vinifera 9,467/822a 6,095/184 5,224/117 2,698/32 11.52,33.12,44.65,84.31 198 Vvi12-Vvi12
9,113b 6,623 5,902 3,779
C. humblotiana vs C. humblotiana 12,648/1,309 6,624/210 4,876/74 3,697/32 9.66,31.54,65.89,115.53 302 Chu11-Chu11
11,376 7,739 6,156 5,033
J. sambac vs J. sambac 14,540/1,850 6,050/267 3,710/88 1,641/19 7.86,22.66,42.16,86.37 159 Jsa11-Jsa11
11,232 6,360 4,444 2,431
S. oblata vs S. oblata 41,227/3,808 24,751/847 17,692/305 11,522/89 10.83,29.22,58.01,129.46 383 Sob06-Sob16
28,882 20,820 17,303 13,214
O. europaea vs O. europaea 5,4582/4,386 36,321/1,132 27,291/450 17,329/119 12.44,32.09,60.65,145.62 643 Oeu14-Oeu07
33,422 26,593 23,177 18,609
F. pennsylvanica vs F. pennsylvanica 45,241/3,606 29,891/896 22,921/369 14,558/92 12.55,33.36,62.12,158.24 581 Fpe15-Fpe06
24,925 21,101 18,900 15,479
C. humblotiana vs F. pennsylvanica 25,736/1,780 18,980/588 14,748/275 9,217/97 14.46,32.28,53.63,95.02 286 Chu11-Fpe21
12,803 vs 19,587 10,530 vs 16,703 8,937 vs 13,981 6,139 vs 9,171
C. humblotiana vs J. sambac 18,596/1,503 12,372/373 9,797/182 6,232/62 12.37,33.17,53.83,100.52 353 Chu07-Jsa08
12,103 vs 12,951 9,494 vs 10,675 8,001 vs 9,059 5,484 vs 6,181
C. humblotiana vs O. europaea 28,184/1,768 21,606/644 17,053/306 10,848/106 15.94,33.55,55.73,102.34 342 Chu11-Oeu06
13,788 vs 22,177 11,615 vs 19,125 10,097 vs 16,151 7,207 vs 10,824
C. humblotiana vs S. oblata 24,503/1,676 18,136/572 14,088/266 9,087/100 14.62,31.71,52.96,90.87 305 Chu07-Sob09
13,081 vs 19,325 10,806 vs 16,236 9,166 vs 13,521 6,362 vs 9,073
C. humblotiana vs V. vinifera 16,698/957 13,205/279 11,824/175 8,588/74 17.45,47.33,67.57,116.05 379 Chu06-Vvi11
12,116 vs 1,1854 10,505 vs 10,579 9,710 vs 9,733 7,833 vs 7,818
F. pennsylvanica vs C. humblotiana 29,128/2,403 19,286/607 14,895/278 9,354/98 12.12,31.77,53.58,95.45 286 Fpe21-Chu11
20,925 vs 12,827 16,951 vs 10,420 14,079 vs 8,839 9,307 vs 6,100
F. pennsylvanica vs J. sambac 39,595/3,179 26,027/681 21,106/302 15,391/116 12.46,38.22,69.89,132.68 526 Fpe13-Jsa02
23,257 vs 15,383 20,118 vs 13,875 18,400 vs 13,091 15,082 vs 11,088
F. pennsylvanica vs O. europaea 65,734/3,404 51,938/976 44,479/414 36,186/138 19.31,53.22,107.44,262.22 1,288 Fpe05-Oeu11
28,272 vs 29,513 27,017 vs 27,946 26,423 vs 27,063 25,410 vs 25,683
F. pennsylvanica vs S. oblata 57,005/3,056 44,468/845 38,178/361 31,294/127 18.65,52.62,105.76,246.41 1,214 Fpe05-Sob04
27,004 vs 25,413 25,507 vs 24,048 24,692 vs 23,234 23,324 vs 22,151
F. pennsylvanica vs V. vinifera 30,400/2,893 18,947/830 12,320/324 4,545/64 10.51,22.83,38.02,71.02 136 Fpe06-Vvi18
20,128 vs 12,463 15,514 vs 9,879 11,340 vs 7,421 4,539 vs 3,268
J. sambac vs C. humblotiana 18,434/1,507 12,310/379 9,670/179 6,173/61 12.23,32.48,54.02,101.2 350 Jsa08-Chu07
13,112 vs 11,479 10,679 vs 9,398 8,956 vs 7,847 6,120 vs 5,421
J. sambac vs F. pennsylvanica 34,088/2,220 25,135/629 20,738/294 15,305/117 15.35,39.96,70.54,130.81 525 Jsa02-Fpe13
15,308 vs 21,693 13,945 vs 19,689 13,156 vs 18,129 11,194 vs 15,034
J. sambac vs O. europaea 36,377/2,095 28,266/680 23,489/322 17,678/134 17.36,41.57,72.95,131.93 647 Jsa02-Oeu12
16,336 vs 24,658 15,263 vs 22,506 14,572 vs 20,707 12,833 vs 17,311
J. sambac vs S. oblata 32,014/1,979 24,146/584 20,434/299 14,947/118 16.18,41.35,68.34,126.67 576 Jsa02-Sob11
15,728 vs 21,548 14,467 vs 19,476 13,779 vs 18,121 11,629 vs 14,832
J. sambac vs V. vinifera 19,432/1,818 12,146/492 8,352/205 3,767/51 10.69,24.69,40.74,73.86 166 Jsa06-Vvi5g
12,791 vs 11,337 10,026 vs 8,982 7,589 vs 6,807 3,683 vs 3,393
O. europaea vs C. humblotiana 29,974/2,136 21,792/672 16,852/299 10,966/110 14.03,32.43,56.36,99.69 338 Oeu06-Chu11
22,814 vs 13,273 19,126 vs 11,267 15,946 vs 9,660 10,948 vs 7,110
O. europaea vs F. pennsylvanica 66,031/3,490 51,859/993 44,390/425 35,694/137 18.92,52.22,104.45,260.54 1,270 Oeu11-Fpe05
30,054 vs 27,278 28,185 vs 26,289 27,173 vs 25,755 25,624 vs 24,786
O. europaea vs J. sambac 40,417/2,848 28,560/690 23,656/324 17,741/134 14.19,41.39,73.01,132.4 642 Oeu12-Jsa02
25,671 vs 16,170 22,617 vs 15,026 20,734 vs 14,314 17,341 vs 12,690
O. europaea vs S. oblata 61,743/3,273 48,410/917 41,789/406 34,091/140 18.86,52.79,102.93,243.51 1,213 Oeu11-Sob04
30,689 vs 27,135 28,556 vs 25,620 27,460 vs 24,993 25,682 vs 23,985
O. europaea vs V. vinifera 30,614/2,604 20,640/848 14,060/351 5,835/80 11.76,24.34,40.06,72.94 136 Oeu18-Vvi14
21,701 vs 12,781 17,213 vs 10,479 12,855 vs 8,141 5,741 vs 4,041
S. oblata vs C. humblotiana 26,529/2,048 18,193/571 14,198/270 9,106/100 12.95,31.86,52.59,91.06 307 Sob09-Chu07
20,175 vs 12,812 16,270 vs 10,535 13,538 vs 9,014 9,082 vs 6,211
S. oblata vs F. pennsylvanica 57,204/3,146 44,125/830 38,177/369 31,036/126 18.18,53.16,103.46,246.32 1,201 Sob04-Fpe05
26,073 vs 26,092 24,264 vs 24,866 23,461 vs 24,191 22,214 vs 22,905
S. oblata vs J. sambac 35,872/2,683 24,574/617 20,465/297 15,114/121 13.37,39.83,68.91,124.91 567 Sob11-Jsa02
22,775 vs 15,650 19,645 vs 14,282 18,125 vs 13,556 14,903 vs 11,537
S. oblata vs O. europaea 61,538/3,258 48,312/915 41,772/410 33,887/138 18.89,52.8,101.88,245.56 1,234 Sob04-Oeu11
27,959 vs 29,938 26,073 vs 28,155 25,396 vs 27,164 24,226 vs 25,435
S. oblata vs V. vinifera 26,910/2,478 17,204/766 11,013/291 4,279/64 10.86,22.46,37.85,66.86 112 Sob03-Vvi19
19,148 vs 12,216 14,572 vs 9,707 10,309 vs 7,187 4,247 vs 3,263
V. vinifera vs C. humblotiana 16,585/968 12,898/266 11,576/168 8,501/73 17.13,48.49,68.9,116.45 369 Vvi11-Chu06
12,100 vs 11,578 10,441 vs 10,194 9,664 vs 9,508 7,816 vs 7,790
V. vinifera vs F. pennsylvanica 25,963/2,168 17,984/784 11,749/311 4,236/60 11.98,22.94,37.78,70.6 134 Vvi18-Fpe06
12,195 vs 18,417 9,790 vs 14,942 7,308 vs 10,878 3,072 vs 4,231
V. vinifera vs J. sambac 18,971/1,765 11,933/478 8,336/206 3,571/48 10.75,24.96,40.47,74.4 167 Vvi18-Jsa12
11,651 vs 12,388 8,902 vs 9,796 6,832 vs 7,569 3,249 vs 3,518
V. vinifera vs O. europaea 27,755/2,120 20,067/821 13,629/338 5,610/76 13.09,24.44,40.32,73.82 137 Vvi14-Oeu18
12,905 vs 20,613 10,598 vs 16,877 8,210 vs 12,539 3,971 vs 5,541
V. vinifera vs S. oblata 24,371/2,074 16,576/741 10,520/279 3,490/50 11.75,22.37,37.71,69.8 114 Vvi19-Sob03
12,269 vs 18,033 9,739 vs 14,250 7,109 vs 9,952 2,820 vs 3,476
Note:
Block_lens: duplicated gene pairs involved in blocks;
ACP: average collinear gene pairs respectively per block;
LDB: number of collinear gene pairs reside in the longest duplicated block;
a: The slash is preceded by the number of blocks, followed by the number of collinear gene pairs;
b: Duplicated genes involved in blocks.