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Overview

Welcome to FGBP

FGBP (Fabaceae Genome Bioinformatics Platform) is our user-friendly, web-based comparative genomics platform based on -- published genomes of 57 Fabaceae species.The FGBP platform stores 1825 dotplots result, multilevel covariates, karyotype evolutionary trajectory animations, gene-wide structural domain identification and replication event-related genes. Analysis results for each Fabaceae family and their relationships can be displayed, searched and downloaded from the database.

物种数据

Citrullus lanatus

Homologues

Gene: 22104


Introduce: Link

Lagenaria siceraria

Homologues

Gene:22234


Introduce: Link

Cucumis melo

Homologues

Gene: 28298


Introduce: Link

Species_name Abbr chr_number Genes_number Data_link CDS PEP GFF3 Reference_link
Begonia darthvaderiana Bda 15 22773 Data_link CDS PPE GFF3 (Li, et al. 2022)
Benincasa hispida Bhi 12 31667 Data_link CDS PPE GFF3 (Xie, et al. 2019)
Begonia loranthoide Blo 12 20077 Data_link CDS PPE GFF3 (Li, et al. 2022)
Begonia masoniana Bma 15 22731 Data_link CDS PPE GFF3 (Li, et al. 2022)
Begonia peltatifolia Bpe 15 19834 Data_link CDS PPE GFF3 (Li, et al. 2022)
Cucurbita argyrosperma Car 20 27998 Data_link CDS PPE GFF3 (Barrera-Redondo, et al. 2021)
Cucumis hystrix Chy 12 22203 Data_link CDS PPE GFF3 (Qin, et al. 2021)
Citrullus lanatus Cla 11 22104 Data_link CDS PPE GFF3 (Guo, et al. 2013)
Cucurbita maxima Cma 20 31283/td> Data_link CDS PPE GFF3 (Sun, et al. 2017)
Cucumis melo Cme 12 28298 Data_link CDS PPE GFF3 (Shin, et al. 2019)
Cucurbita moschata Cmo 20 32023 Data_link CDS PPE GFF3 (Sun, et al. 2017)
Cucurbita pepo Cpe 20 26232 Data_link CDS PPE GFF3 (Montero-Pau, et al. 2018)
Cucumis sativus Csa 7 23522 Data_link CDS PPE GFF3 (Li, et al. 2019)
Lagenaria siceraria Lsi 11 22234 Data_link CDS PPE GFF3 (Wu, et al. 2017)
Vitis vinifera Vvi 19 23,647 Data_link CDS PPE GFF3 (Jaillon, et al. 2007)

Update log

  • Nov. 6, 2021   The "Blast visualization", which can search function annotation and position, is now available

  • Dec. 27, 2020   The "Circle" has been updated

  • Aug. 5, 2020   The "Gene families", which can search gene of Triticeae by well-stueied gene of rice, maize, and Arabidopsis, is now available

  • May. 7, 2020   The "P-index", which can show collinearity in macro-region, is now available

  • Apr. 15, 2020   The "specie_tree", which can show collinearity in micro-region, is now available

  • Nov. 6, 2020   The "Dotplot", which can search function annotation and position, is now available

  • Aug. 2, 2019   Comparative genomics research platform of early eudicots (CGRPOEE) plantform is now open

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